CDS
| Accession Number | TCMCG057C50876 |
| gbkey | CDS |
| Protein Id | XP_018456519.1 |
| Location | join(30485214..30485288,30485383..30485512,30485704..30485749,30486034..30486094,30486200..30486334,30486442..30486558,30486649..30486814,30487321..30487433,30487600..30487674,30488062..30488283,30488376..30488434,30488533..30488617,30488708..30488845,30489092..30489316,30489399..30490111,30490191..30490354,30490590..30490894) |
| Gene | LOC108827586 |
| GeneID | 108827586 |
| Organism | Raphanus sativus |
Protein
| Length | 942aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018601017.1 |
| Definition | PREDICTED: protein RRC1 isoform X1 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | RNA recognition motif (RRM)-containing protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12842
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005654 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGAGCTCCTTCTCAATTACCCGAAAGAAAACGCCGTTCCAGAAACACAAGGAAGAAGAAGAAGCCAGGAAGAAGAAAGCTGAGGATGAGACGGCGCGTCTCTATCAGGAGTTCGTGGAGTCGTTCCAAGGGGAGAGTGGAACCAAGACCTTTGTTCGAGGTGGCACAATTAACCCCGGCGAGAAACCTAAAGTTGATTCCCAAGGTGAAAAGTCCAAAGATGGGGGTTCGGTTTCCAAGAAGGGAAGTAGGTATGTTCCCTCTTTTCTTCCTCCACCAATGGCATCCAAGAGTAAAGAAACAGAGAGGAAGAGGGAGGAAGAGAGACCGAAGGAGAGAGAAAAAGGAAAGACTCGAAATATAGATAATTTTATGGAGGAGTTAAAGCGTGAACAAGAGTTGAGGGAAAGAAGAAACCAGGATCGTGACCGTCAGGGCGATAGCTCGCCTTCTAGCCGCTTTGATGAGCTACCTGATGAATTTGATCCAACTGGAAGGCTAGGATCGTTTGATGATGGTGACCCACAAACGACGAATTTGTATGTTGGGAATCTATCCCCAAAGGTTGATGAAAACTTTCTTTTGCGCACGTTTGGAAGATTTGGTCCCATAGCCAGTGTCAAGATTATGTGGCCAAGAACAGATGAGGAGAAGAGGCGACAAAGAAACTGTGGATTTGTTTCCTTCATGCATAGAGCTGATGGACAAGCTGCAAAAGATGAAATGCAAGGGATCATCGTGTACGATTATGAACTGAAGATTGGTTGGGGTAAAGCGGTTTCTCTACCATCACAAGCATTACCCGCTCCACCACCTGGACATATGGCTATTCGTAGTAAGGAGGGCTGCAACTTGATTTTTTCTGGTCAATCGGGTCCACCAATAATAACTTCTGTTCCAACTCAAAATTCTGAGCTGGTTCTTACCCCCAATGTTCCGGACATCACTGTTGTTACTCCTGAGAACGAGCACCTCAGACATGTGATTGATACAATGGCTCTCTATGTTCTTGATGGTGAATGTGCGTTTGAACAAGCTATCATGGAGAGGGGCCGCGGGAATCCACTGTTTAGTTTCTTGTTTGAGCTGGGATCAAAGGAGCATACTTACTACGTCTGGAGACTCTATTCCTTTGCTCAGGGTGATACACTTCAAAGGTGGAGAACCGAGCCGTATATCATGATAACTGGTAGTGGAAGATGGATACCACCACCACTGCCTGTAAATAAAAGCCTGGAGCATGACAAAGAGTCAGCAAGCACATATGCAGCCGGAAGAAGCAGGCGTGCGGAAGTTGAGAGGCCTCTGACCGATCCTCAAAGGGATGACTTCGAGGACATGTTGCGTGCTCTAACTCTAGAAAGGAGTCAAATAAAAGAAGCTATGGGCTTCGCTTTAGATAATGCAGATGCAGCCGGAGAGGTTGTGGAAGTTCTGACGGAGTCCCTGACCCTAAAGGAGACATCAATTCCAACTAAAGTTGCGAGGCTCATGCTTGTGTCTGATATTCTTCATAATAGCAGCGCACCTGTTAAAAATGCATCTGCATACCGAACCAAGTTCGAAGCAACACTTCCCGATATAATGGAAAGCTTCAATGATCTGTACCGGAGCATAACTGGAAGAATTACTGCTGAGGCTCTAAAAGAACGTGTTCTCAAAGTTCTGCAAGTATGGGCGGATTGGTTTCTCTTTTCAGATGCATACATAAATGGACTACGTACAACATTTCTTCGTTCGGGAATCTCGGGCGTTACCTTATTTCATTCTATCTGCGGTGATGCACCTGAGATAGAGAAGAAAGGTTATAACAATAACAATATCAGCGATACTGGCTATCCAGATACTGCACTGGCAATCGGCAAAGAGGGAGCAAGGCAAGAGCTGATGGATTTACCAATTTCTGAGCTTGAAAGACGCTGCCGACACAATGGGCTGTCTCTTGTAGGGGGCAGAGTAGTGATGGTTGCTCGGCTACTAAGCCTTGAAGACACAGAGAAACAACGTGGATATGAAGCAGTGGATGAAATTTCAAAGTATCCGCAGCAAGACCATTCGACTTGGGACGAAGTAAGGAATGAGCCTGAGGTTGAATTGAAAGAGCCTATGAATCTGGCCACGACAATACCAATCCCTCAGCCTGAGCTGAAAACCTTCGTGGGAAAGGAGAAGAGCGACCTCATGTTGACAGCTTCAAAATGGGCTAAAGAGGATGACTATGCTGACGATGAACCAAAGAAGAGCTACTCTCCGGGAAGCGGCAATACTGGTGGGGTAACTTTTAAGGCCGATGACGAGGATCTCAAGAGTAATGACCGTGTTCGTACCCAACCTGACAATGGAATGGACGAGGAACAAAGACAAAAGAGGAGACGCATAGAAGTTGCGTTGATAGAGTATCGTGAAACTCTCGAGGAACAGGGGATGAAAAACTCCGAGGAGATAGAGAAAAAAGTAGAAATCAAACGAAAGAGGCTTGAAGTTGATTATGGCTTAACAGGATCTAACGAGGGCAATAGAAATCTGCTTTTAACTGCAGAAAAATCAATAGTAGAGAGGAAGGAGAGGCCCGAAGATTCTCGAGAATCTTCTAAGAAGCGACAGCGTGGGGGAAACCAGAGCCAAAGTCCACCAAAGAAATCATCGACCAGGGAGAGAGATCATGACTTGGACCGAGACAGGGACAGAGGGAGAGTCAGAGACAGAGACAGAGATAGGCAACATGATTTGAACAGGGATCGACGTGAAAAGAGTTCAAGCCACGAGCGAGACGATCATAGTACAAGCAGAGAAAGAGACAGGGAGTGGCGCAGACGAGGCATGAGATGA |
| Protein: MSSFSITRKKTPFQKHKEEEEARKKKAEDETARLYQEFVESFQGESGTKTFVRGGTINPGEKPKVDSQGEKSKDGGSVSKKGSRYVPSFLPPPMASKSKETERKREEERPKEREKGKTRNIDNFMEELKREQELRERRNQDRDRQGDSSPSSRFDELPDEFDPTGRLGSFDDGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTDEEKRRQRNCGFVSFMHRADGQAAKDEMQGIIVYDYELKIGWGKAVSLPSQALPAPPPGHMAIRSKEGCNLIFSGQSGPPIITSVPTQNSELVLTPNVPDITVVTPENEHLRHVIDTMALYVLDGECAFEQAIMERGRGNPLFSFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPYIMITGSGRWIPPPLPVNKSLEHDKESASTYAAGRSRRAEVERPLTDPQRDDFEDMLRALTLERSQIKEAMGFALDNADAAGEVVEVLTESLTLKETSIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESFNDLYRSITGRITAEALKERVLKVLQVWADWFLFSDAYINGLRTTFLRSGISGVTLFHSICGDAPEIEKKGYNNNNISDTGYPDTALAIGKEGARQELMDLPISELERRCRHNGLSLVGGRVVMVARLLSLEDTEKQRGYEAVDEISKYPQQDHSTWDEVRNEPEVELKEPMNLATTIPIPQPELKTFVGKEKSDLMLTASKWAKEDDYADDEPKKSYSPGSGNTGGVTFKADDEDLKSNDRVRTQPDNGMDEEQRQKRRRIEVALIEYRETLEEQGMKNSEEIEKKVEIKRKRLEVDYGLTGSNEGNRNLLLTAEKSIVERKERPEDSRESSKKRQRGGNQSQSPPKKSSTRERDHDLDRDRDRGRVRDRDRDRQHDLNRDRREKSSSHERDDHSTSRERDREWRRRGMR |